Cross-supplier workflows
One pipeline, several suppliers No single manufacturer is best at every stage. These 45 workflows show the product we recommend at each step, the alternatives we also supply, and the plasticware to run them. Final compatibility, input amounts and read depth are confirmed with you for each project.
All (45) Cancer genomics (10) Inherited disorders (5) Transplantation & transfusion (2) Long-read genomics (4) Reproductive health (2) Pharmacogenomics (1) Infectious disease (1) Immunoassays & antibodies (3) Cell biology (2) Biopharma QC (1) Proteomics (1) Animal health (5) Food & feed safety (5) Plant & crop (2) Microbiome (1)
Need catalogue numbers and pricing? The Workflow Designer turns a workflow into a verified bundle with every kit, accessory and known gap listed.
Open Workflow Designer → Building an NGS workflow? Start from one of our NGS templates, swap any step for another product in our range, and send the list for a quote.
Open NGS Builder → Recommended default Alternative Sourced per project
Cancer genomics
Solid-Tumour Comprehensive Profiling Hybrid-capture profiling of tumour DNA from FFPE or fresh tissue: SNVs, indels, CNVs, TMB and MSI.
01 Nucleic-acid extraction
Takara Bio · recommendedNucleoSpin DNA FFPE / tissue purification 02 Input QC
Allsheng · recommendedFluorometer + micro-spectrophotometer 03 Library preparation
4bases ONCO4B-IVD kit (CE-IVD, all-in-one) 05 Library QC
Allsheng · recommendedBiofragment Analysis System 06 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
07 Analysis & reporting
Sourced per project · recommended Analysis partner: pipeline and reporting scoped with you
4bases Matched 4bases analysis & clinical reporting software JET BIOFIL consumablesFilter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates The 4bases ONCO4B-IVD route replaces library prep, enrichment and reporting with one CE-IVD kit and its own software.
Cancer genomics
Hereditary Breast & Ovarian Cancer (BRCA1/2) Germline testing of BRCA1, BRCA2 and related HRR genes for patients and at-risk relatives.
01 DNA extraction (blood)
Takara Bio · recommendedNucleoSpin DNA purification 02 Input QC
Allsheng Fluorometer + micro-spectrophotometer 03 Library preparation
4bases · recommendedBRaCA panel (CE-IVD) 05 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
06 Analysis & reporting
4bases · recommended4bases germline variant analysis & report Sourced per project Analysis partner: pipeline and reporting scoped with you
JET BIOFIL consumablesFilter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates Pair with the tumour HRD workflow when PARP-inhibitor eligibility is the clinical question.
Cancer genomics
Tumour HRD & PARP-Inhibitor Eligibility Homologous recombination deficiency and somatic BRCA status from tumour DNA, for ovarian, breast and prostate cancer.
01 Nucleic-acid extraction
02 Input QC
Allsheng · recommendedFluorometer + micro-spectrophotometer 03 Library preparation & capture
4bases · recommendedHRD pro kit 04 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
05 Analysis & reporting
4bases HRD score & somatic variant report JET BIOFIL consumablesFilter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates Cancer genomics
Haematological Malignancy Panel Myeloid and lymphoid neoplasm profiling from blood or bone marrow for diagnosis, risk stratification and therapy choice.
01 Nucleic-acid extraction
Takara Bio · recommendedNucleoSpin blood DNA / RNA purification 02 Input QC
Allsheng Fluorometer + micro-spectrophotometer 03 Library preparation
4bases · recommendedHEMATO pro kit 04 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
05 Analysis & reporting
4bases HEMATO pro analysis & report 06 Rapid PCR markers
AM Diagnostics BCR-ABL and JAK2 V617F PCR kits (diagnosis and monitoring) JET BIOFIL consumablesFilter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates Cancer genomics
Gene Fusion & Expression (Tumour RNA) Detect actionable fusions such as ALK, ROS1, RET, NTRK and NRG1 from tumour RNA.
01 RNA extraction
Takara Bio NucleoSpin RNA FFPE / tissue purification 02 RNA QC
Allsheng Biofragment Analysis System (integrity) 03 Library preparation
4bases · recommendedFUSION pro kit 04 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
05 Analysis & reporting
4bases · recommendedFusion calling & report Sourced per project Analysis partner: pipeline and reporting scoped with you
JET BIOFIL consumablesFilter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates For full-length fusion transcripts, see the long-read Iso-Seq workflow.
Cancer genomics
Lung & Colorectal Hotspot Panel Fast, low-input amplicon panels for EGFR, KRAS, NRAS, BRAF and PIK3CA hotspots, suited to smaller labs.
02 Input QC
Allsheng Fluorometer + micro-spectrophotometer 05 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
06 Analysis & reporting
Sourced per project Analysis partner: pipeline and reporting scoped with you
JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes Cancer genomics
Liquid Biopsy & ctDNA Monitoring Circulating tumour DNA profiling for treatment response and recurrence monitoring from a blood draw.
01 Blood collection
Sourced per project cfDNA-stabilising blood collection tubes
03 cfDNA QC
Allsheng · recommendedBiofragment Analysis System 06 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
07 Analysis & reporting
Sourced per project Analysis partner: pipeline and reporting scoped with you
JET BIOFIL consumables15 mL centrifuge tubes (plasma separation) · Filter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates Low-frequency variant calling needs UMI-aware analysis and deep coverage; we size read depth with you before ordering.
Cancer genomics
Pre-Chemotherapy DPYD Testing Screen for DPYD variants before fluoropyrimidine (5-FU, capecitabine) treatment to avoid severe toxicity.
JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes Cancer genomics
Cancer Cell Models & Drug Response Grow cancer cell lines or primary tumour cells and measure viability, apoptosis and signalling after treatment.
01 Cells
Cytion · recommendedSTR-authenticated cancer cell lines Procell Primary tumour-associated cells & cell lines 02 Culture
Procell · recommendedSpecialised media, FBS & cytokines 03 Viability & apoptosis
Elabscience Cell viability, apoptosis & cell-cycle assay kits 04 Pathway readout
Elabscience · recommendedPhospho-protein ELISA & flow antibodies 05 Imaging & quantitation
LICORbio · recommendedIn-Cell Western & Odyssey imaging JET BIOFIL consumablesCell culture flasks, dishes & multiwell plates · Serological pipettes · 15 / 50 mL centrifuge tubes · Cryogenic vials · Vacuum filtration units for media Cancer genomics
Single-Cell RNA-seq (Tumour Heterogeneity) Resolve tumour heterogeneity and the immune micro-environment cell by cell.
01 Tissue dissociation
Allsheng · recommendedAutomated tissue dissociation & cell counter Procell Dissociation enzymes & reagents 02 Library preparation
Takara Bio · recommendedSMART-Seq full-length single-cell kits PacBio Kinnex single-cell RNA kit (long-read) 03 Sequencing
Sourced per project · recommended Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
PacBio Revio system (Kinnex route) 04 Analysis
Sourced per project Clustering and cell-type annotation
JET BIOFIL consumablesFilter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates · Cell strainers & 15 mL tubes Inherited disorders
Clinical Exome for Rare Disease Exome sequencing of the patient (or trio) to diagnose suspected monogenic and developmental disorders.
01 DNA extraction (blood)
Takara Bio · recommendedNucleoSpin DNA purification 02 Input QC
Allsheng Fluorometer + micro-spectrophotometer 05 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
06 Analysis & reporting
Sourced per project Analysis partner: pipeline and reporting scoped with you
JET BIOFIL consumablesFilter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates Unsolved cases can move to HiFi whole-genome sequencing to catch structural variants and repeats that exomes miss.
Inherited disorders
Inherited Cardiac Conditions Panels for cardiomyopathies, channelopathies, aortopathies and familial hypercholesterolaemia.
03 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
JET BIOFIL consumablesFilter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates Inherited disorders
Repeat-Expansion Disorders Size and characterise repeat expansions in Fragile X, Huntington disease, ataxias and ALS/FTD in one assay.
01 HMW DNA extraction
PacBio Nanobind HMW DNA extraction 02 Sample prep & QC
Allsheng Fluorometer + micro-spectrophotometer 03 Targeted library
PacBio PureTarget Repeat Expansion Panel 05 Analysis
PacBio SMRT Link repeat analysis JET BIOFIL consumablesWide-bore & filter pipette tips · Low-bind microcentrifuge tubes · PCR strips Short reads cannot span most pathogenic expansions; this is a long-read-only application.
Inherited disorders
Cystic Fibrosis Testing CFTR variant detection for diagnosis and carrier screening.
JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes Inherited disorders
Thrombophilia Risk Factor V Leiden, prothrombin and related variants that raise thrombosis risk.
JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes Transplantation & transfusion
HLA Typing & Antibodies for Transplantation Type donor and recipient HLA by real-time PCR, SSO or SSP, and find donor-specific HLA antibodies before and after transplant.
01 Samples
Sourced per project EDTA blood from donor and recipient; serum for antibodies
02 DNA extraction
Takara Bio · recommendedNucleoSpin Blood DNA purification 03 HLA typing (PCR)
BAG Diagnostics · recommendedHISTO TYPE Rainbow real-time PCR: 11 HLA loci on one 96-well plate PacBio HiFi full-gene HLA typing (high resolution) 06 Automation & interpretation
JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes Real-time PCR gives the fastest typing; add SSO or SSP to resolve ambiguities, and long-read HiFi when allele-level resolution is needed.
Transplantation & transfusion
Blood-Group Typing & Fetal RhD ABO and RhD grouping with antisera, extended blood-group genotyping for multiply transfused patients, and fetal RhD from the mother's blood.
01 Samples
Sourced per project EDTA blood; maternal plasma for fetal RhD
03 DNA extraction
Takara Bio · recommendedNucleoSpin Blood DNA purification 06 Instruments & software
Allsheng · recommendedReal-time PCR system JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes Serology answers most routine questions; genotyping settles weak D, partial D and patients whose red cells are coated or recently transfused.
Long-read genomics
PacBio HiFi Whole-Genome Sequencing HiFi long reads resolve structural variants, repeat expansions, phasing and native 5mC in one run.
01 HMW DNA extraction
PacBio Nanobind HMW DNA extraction 05 Sequencing
PacBio · recommendedRevio system 06 Analysis
PacBio SMRT Link: HiFi variant, SV and 5mC calling JET BIOFIL consumablesWide-bore & filter pipette tips · Low-bind microcentrifuge tubes · PCR strips Also used for agrigenomics: crop and livestock reference genomes and pan-genomes.
Long-read genomics
Full-Length RNA (Iso-Seq) Full-length transcripts reveal isoforms and fusion partners without assembly.
02 RNA QC
Allsheng Biofragment Analysis System (integrity) 03 Library preparation
PacBio Kinnex full-length RNA kit 05 Analysis
PacBio SMRT Link Iso-Seq pipeline JET BIOFIL consumablesWide-bore & filter pipette tips · Low-bind microcentrifuge tubes · PCR strips Long-read genomics
DNA Methylation Profiling Two routes to methylation biomarkers: native 5mC from HiFi reads, or targeted enzymatic methyl-seq on short reads.
01 DNA extraction
PacBio · recommendedNanobind HMW DNA extraction (HiFi route) Takara Bio NucleoSpin DNA purification (short-read route) 03 Library preparation
PacBio · recommendedSMRTbell Prep Kit 3.0 (native 5mC, no conversion) 04 Sequencing
PacBio · recommendedRevio system Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
05 Analysis
PacBio · recommendedSMRT Link 5mC calling Sourced per project Methylation calling (short-read route)
JET BIOFIL consumablesWide-bore & filter pipette tips · Low-bind microcentrifuge tubes · PCR strips Long-read genomics
High-Resolution HLA Typing Phased, full-gene HLA typing for transplant matching and immunotherapy research.
02 Library preparation
PacBio · recommendedFull-length HLA amplicons + SMRTbell Prep Kit 3.0 03 Routine typing alongside
BAG Diagnostics HISTO TYPE Rainbow real-time PCR or HISTO SPOT SSO for fast low-to-medium resolution 06 Analysis
Sourced per project HLA typing software, scoped per project
JET BIOFIL consumablesWide-bore & filter pipette tips · Low-bind microcentrifuge tubes · PCR strips HLA amplicon primers and typing software are chosen with you; neither is a PacBio catalogue kit.
Reproductive health
Non-Invasive Prenatal Testing (NIPT) cfDNA screening for T21, T18, T13 and sex-chromosome aneuploidies, by NGS or by digital PCR.
01 Blood collection
Sourced per project cfDNA-stabilising blood collection tubes
05 Detection
Sourced per project · recommended Short-read sequencer (NGS route)
Sourced per project naica or QIAcuity digital PCR (iSAFE route)
06 Fetal fraction & report
07 Fetal RhD (RhD-negative mothers)
JET BIOFIL consumables15 mL centrifuge tubes (plasma separation) · Filter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates The two routes are alternatives: choose NGS for scale, digital PCR for low-volume labs without a sequencer.
Reproductive health
Pregnancy Loss & Male Infertility Rapid aneuploidy testing of products of conception and genetic causes of male-factor infertility.
02 Assay
Yourgene Health · recommendedPregnancy Loss & Male Factor Infertility Panels AM Diagnostics Thrombophilia PCR kits (Factor V Leiden, Factor II, MTHFR, PAI-1) JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes Pharmacogenomics
Pharmacogenomics (PGx) Panel Germline PGx panels to guide chemotherapy, immunosuppression and pain-management dosing.
03 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
04 Analysis & reporting
Sourced per project Star-allele calling and PGx report
JET BIOFIL consumablesFilter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates Infectious disease
Infectious Disease Testing Molecular detection, serology and viral drug-resistance genotyping for clinical and veterinary labs.
01 Extraction
Takara Bio · recommendedViral DNA/RNA purification 02 Molecular detection
Takara Bio One Step PrimeScript RT-PCR (lab-developed assays) 04 T-cell immunity
Mabtech ELISpot Path panels (TB, CMV, EBV, SARS-CoV-2) 05 Viral genotyping & resistance
06 Real-time PCR kits
AM Diagnostics · recommendedCE-marked PCR kits: hepatitis, HIV, CMV, TB, respiratory, STI and AMR panels 07 qPCR master mix (lab-developed tests)
Takara Bio · recommendedPremix Ex Taq (Probe qPCR) / One Step PrimeScript RT-PCR JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes · Assay microplates Stages are independent test types; labs usually adopt the ones matching their menu.
Immunoassays & antibodies
Cytokine & Biomarker ELISA Quantify cytokines, hormones and disease biomarkers in serum, plasma or culture supernatant.
01 Sample prep
Sourced per project Serum / plasma / supernatant collection
02 Immunoassay
Mabtech ELISA kits & EYRAplex multiplex 03 Standards & spikes
Procell · recommendedRecombinant cytokines 04 Wash & read
Allsheng Microplate washer & multi-mode reader JET BIOFIL consumablesFilter pipette tips · Assay microplates · Microcentrifuge tubes · Syringe filters Immunoassays & antibodies
Flow Cytometry Immunophenotyping Characterise immune-cell populations and activation markers in blood or cultured cells.
01 Cells
Sourced per project · recommended PBMC or whole blood
02 Stimulation
Procell · recommendedRecombinant cytokines Mabtech Peptide pools for T-cell stimulation 04 Functional readout
Mabtech · recommendedELISpot / FluoroSpot kits JET BIOFIL consumablesSerological pipettes · 15 / 50 mL centrifuge tubes · Filter pipette tips · Round-bottom tubes & multiwell plates Immunoassays & antibodies
Antibody & Antigen Validation (Western / ICW) Confirm antibody specificity and quantify target proteins by quantitative Western blot and In-Cell Western.
01 Antigen / positive control
Elabscience · recommendedRecombinant proteins & antigens 03 Detection
LICORbio · recommendedFluorescent secondary antibodies JET BIOFIL consumablesFilter pipette tips · Microcentrifuge tubes · Multiwell plates (ICW) Cell biology
Primary Cell & Stem Cell Culture Isolate, expand and bank primary or stem cells with defined media, sera and growth factors.
01 Cells
Procell · recommendedPrimary cells (human & animal) Cytion Primary cells & authenticated lines 02 Media & growth factors
Procell · recommendedSpecialised & serum-free media, cytokines 03 Serum
Procell · recommendedFetal bovine serum 04 Characterisation
Elabscience · recommendedFlow antibodies for surface markers 05 Banking
Cytion Cell banking & sample storage service Sourced per project · recommended In-house cryopreservation
JET BIOFIL consumablesCell culture flasks, dishes & multiwell plates · Serological pipettes · 15 / 50 mL centrifuge tubes · Cryogenic vials · Vacuum filtration units for media Cell biology
Cell-Based Assays Measure proliferation, cytotoxicity, oxidative stress and secreted proteins in cultured cells.
01 Cells
Procell · recommendedCell lines & primary cells 02 Culture
Procell · recommendedMedia, FBS & reagents JET BIOFIL consumablesCell culture flasks, dishes & multiwell plates · Serological pipettes · 15 / 50 mL centrifuge tubes · Assay microplates Biopharma QC
Biologics & Cell Therapy QC Release and in-process testing for cell-line-derived products: residual DNA, mycoplasma, potency and standards.
01 Cell lines
Cytion · recommendedSTR-authenticated production & assay cell lines 02 Culture & expansion
Procell Serum-free media & cytokines 03 Residual host-cell DNA
Shentek Bio · recommendedResidual host-cell DNA quantitation kits 05 Potency
Mabtech ELISpot / FluoroSpot (T-cell products) 06 Reference standards
NIBSC WHO International Standards JET BIOFIL consumablesCell culture flasks, dishes & multiwell plates · Serological pipettes · 15 / 50 mL centrifuge tubes · PCR plates & strips · Syringe filters Proteomics
Recombinant Protein Expression & Validation Clone, express, purify and quantify a recombinant protein.
02 Expression host
Cytion · recommendedHEK293 / CHO cell lines 05 Imaging & quantitation
LICORbio Odyssey imaging & quantitative Western reagents JET BIOFIL consumablesCell culture flasks, dishes & multiwell plates · Serological pipettes · 15 / 50 mL centrifuge tubes · Filter pipette tips · Syringe filters Animal health
Poultry Flock Surveillance Serology to track vaccination and exposure, and real-time PCR to confirm active infection in broiler, layer and breeder flocks.
01 Samples
Sourced per project Serum, tracheal / cloacal swabs, tissue
02 Nucleic-acid extraction
Takara Bio · recommendedViral DNA/RNA purification 04 Pathogen PCR
BioStone Animal Health · recommendedPoultry real-time PCR: avian influenza, Newcastle disease, IBV, IBDV, ILT, MG / MS, Salmonella 05 Instruments
Allsheng · recommendedReal-time PCR system + microplate washer & reader JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes · Assay microplates Run serology before and after vaccination to check titres; send PCR only on suspect birds to keep costs down.
Animal health
Cattle, Buffalo & Small-Ruminant Herd Health Herd screening from serum or milk and PCR confirmation of blood-borne and reproductive pathogens.
01 Samples
Sourced per project Serum, bulk-tank or individual milk, whole blood
02 Extraction
Takara Bio · recommendedNucleoSpin blood / tissue DNA purification 04 Pathogen PCR
AM Diagnostics VET TECH BVDV, bluetongue, bovine rotavirus and Brucella PCR kits 05 Instruments
Allsheng Real-time PCR system + microplate reader JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes · Assay microplates Animal health
Swine Disease Monitoring Sow-herd and grower serology with PCR for respiratory and systemic pathogens.
01 Extraction
Takara Bio · recommendedViral DNA/RNA purification 04 Instruments
Allsheng Real-time PCR system + microplate reader JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes · Assay microplates Animal health
Aquaculture Pathogen Screening PCR screening of fish and shrimp stock and hatchery water for bacterial and viral pathogens.
01 Samples
Sourced per project Tissue, gill, fry or water filtrate
JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes · Syringe filters & vacuum filtration units Animal health
Companion-Animal Diagnostics PCR panels and allergy testing for veterinary clinics and pet diagnostic labs.
JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes Food & feed safety
Meat Species & Halal Authentication Detect undeclared pork, beef, mutton or other species in raw and processed meat products.
01 Sample prep
Sourced per project Homogenised raw or processed product
04 Readout
Allsheng · recommendedReal-time PCR system JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes · 50 mL centrifuge tubes For in-house primer design across more species, see JBS's species-ID primer designer.
Food & feed safety
Veterinary Drug Residues Screen milk, meat, eggs, honey and fish for antibiotic and other veterinary drug residues before release or export.
01 Extraction
Sourced per project Kit-specific sample extraction
03 Read
Allsheng · recommendedMicroplate washer & reader JET BIOFIL consumablesFilter pipette tips · Assay microplates · Microcentrifuge tubes · Syringe filters · 50 mL centrifuge tubes Food & feed safety
Mycotoxins in Grain & Feed Aflatoxin, ochratoxin, DON, zearalenone and fumonisin testing in grain, feed and food.
01 Extraction & clean-up
PriboLab Immunoaffinity columns & sample prep 04 Read
Allsheng · recommendedMicroplate reader & washer JET BIOFIL consumablesFilter pipette tips · Assay microplates · Microcentrifuge tubes · Syringe filters · 50 mL centrifuge tubes Food & feed safety
Food Allergen Testing Check products and clean-downs for gluten, milk, egg, peanut and other allergens.
01 Swab / sample prep
Sourced per project Product sample or surface swab
JET BIOFIL consumablesFilter pipette tips · Assay microplates · Microcentrifuge tubes · Syringe filters Food & feed safety
Food Pathogen Detection Detect Salmonella, Listeria, E. coli and other pathogens in raw and processed food.
02 Detection
AM Diagnostics Salmonella, E. coli O157, Campylobacter and norovirus PCR kits JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes · Petri dishes & 50 mL tubes Plant & crop
GMO Screening of Seed & Grain Screen, identify and quantify GM events in seed, grain and feed for import, export and labelling compliance.
01 DNA extraction
Takara Bio NucleoSpin Food / Plant DNA purification 03 Event identification & quantitation
05 Readout
Allsheng · recommendedReal-time PCR system JET BIOFIL consumablesFilter pipette tips · PCR plates & strips · Microcentrifuge tubes Plant & crop
Marker Genotyping for Crop Breeding Genotype hundreds of SNP markers across breeding populations for marker-assisted selection.
01 DNA extraction
Takara Bio · recommendedNucleoSpin Plant DNA / NucleoMag automated 03 Sequencing
Sourced per project Short-read sequencer (Illumina / Element-compatible; platform agreed per project)
04 Analysis
Sourced per project Genotype calling
JET BIOFIL consumablesFilter pipette tips · Low-bind microcentrifuge tubes · PCR strips & plates For new crop reference genomes, use the PacBio HiFi whole-genome workflow.
Microbiome
Long-Read Microbiome Profiling Full-length 16S and HiFi shotgun metagenomes classify microbes to species and strain level.
01 DNA extraction
Takara Bio NucleoSpin DNA purification (stool / soil) 02 Library preparation
PacBio · recommendedKinnex 16S rRNA kit PacBio SMRTbell Prep Kit 3.0 (shotgun metagenome) 05 Analysis
PacBio HiFi 16S & metagenomics pipelines JET BIOFIL consumablesWide-bore & filter pipette tips · Low-bind microcentrifuge tubes · PCR strips Applies equally to tumour, gut, soil and rumen samples.